Protein–RNA interactions for Protein: O35324

Sh2d1b, SH2 domain-containing protein 1B, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1bO35324 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Gm12490-201ENSMUST00000120255 560 ntBASIC13.34□□□□□ -0.27
Sh2d1bO35324 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1bO35324 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.34□□□□□ -0.27
Sh2d1bO35324 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1bO35324 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.34□□□□□ -0.27
Sh2d1bO35324 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.34□□□□□ -0.27
Sh2d1bO35324 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sh2d1bO35324 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2d1bO35324 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh2d1bO35324 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh2d1bO35324 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.33□□□□□ -0.28
Sh2d1bO35324 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Gm5279-201ENSMUST00000199575 745 ntBASIC13.33□□□□□ -0.28
Sh2d1bO35324 Gm18624-201ENSMUST00000220966 658 ntBASIC13.33□□□□□ -0.28
Sh2d1bO35324 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2d1bO35324 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh2d1bO35324 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.32□□□□□ -0.28
Sh2d1bO35324 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.32□□□□□ -0.28
Sh2d1bO35324 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Gm14928-201ENSMUST00000120198 477 ntBASIC13.32□□□□□ -0.28
Sh2d1bO35324 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.32□□□□□ -0.28
Sh2d1bO35324 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.32□□□□□ -0.28
Sh2d1bO35324 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Gm6180-201ENSMUST00000065243 498 ntBASIC13.32□□□□□ -0.28
Sh2d1bO35324 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.32□□□□□ -0.28
Sh2d1bO35324 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.32□□□□□ -0.28
Sh2d1bO35324 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2d1bO35324 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1bO35324 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1bO35324 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1bO35324 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1bO35324 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh2d1bO35324 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.31□□□□□ -0.28
Sh2d1bO35324 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms