Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Bhlhe40O35185 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.18□□□□□ -0.14
Bhlhe40O35185 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Carlr-201ENSMUST00000181515 2574 ntBASIC14.18□□□□□ -0.14
Bhlhe40O35185 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Gm15321-201ENSMUST00000121290 288 ntBASIC14.18□□□□□ -0.14
Bhlhe40O35185 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.18□□□□□ -0.14
Bhlhe40O35185 Gm29667-201ENSMUST00000190817 490 ntBASIC14.18□□□□□ -0.14
Bhlhe40O35185 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.18□□□□□ -0.14
Bhlhe40O35185 Mir125a-201ENSMUST00000083545 68 ntBASIC14.18□□□□□ -0.14
Bhlhe40O35185 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.18□□□□□ -0.14
Bhlhe40O35185 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Bhlhe40O35185 Syt7-205ENSMUST00000224135 1557 ntBASIC14.17□□□□□ -0.14
Bhlhe40O35185 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.17□□□□□ -0.14
Bhlhe40O35185 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Bhlhe40O35185 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Bhlhe40O35185 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Gm10275-202ENSMUST00000168697 495 ntBASIC14.16□□□□□ -0.14
Bhlhe40O35185 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Gm10275-201ENSMUST00000092620 635 ntBASIC14.16□□□□□ -0.14
Bhlhe40O35185 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 255.8 ms