Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15□□□□□ -0.01
Ebf3O08791 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ebf3O08791 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ebf3O08791 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ebf3O08791 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.99□□□□□ -0.01
Ebf3O08791 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.99□□□□□ -0.01
Ebf3O08791 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Gm12134-201ENSMUST00000122109 520 ntBASIC14.99□□□□□ -0.01
Ebf3O08791 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.99□□□□□ -0.01
Ebf3O08791 Gm27838-201ENSMUST00000184829 128 ntBASIC14.99□□□□□ -0.01
Ebf3O08791 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.99□□□□□ -0.01
Ebf3O08791 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.99□□□□□ -0.01
Ebf3O08791 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.99□□□□□ -0.01
Ebf3O08791 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ebf3O08791 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ebf3O08791 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.98□□□□□ -0.01
Ebf3O08791 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Ebf3O08791 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.98□□□□□ -0.01
Ebf3O08791 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ebf3O08791 Gm5566-201ENSMUST00000116118 459 ntBASIC14.98□□□□□ -0.01
Ebf3O08791 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.98□□□□□ -0.01
Ebf3O08791 Shd-206ENSMUST00000225145 998 ntBASIC14.98□□□□□ -0.01
Ebf3O08791 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ebf3O08791 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ebf3O08791 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.98□□□□□ -0.01
Ebf3O08791 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.98□□□□□ -0.01
Ebf3O08791 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ebf3O08791 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ebf3O08791 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ebf3O08791 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Ebf3O08791 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.97□□□□□ -0.01
Ebf3O08791 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ebf3O08791 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ebf3O08791 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Ebf3O08791 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ebf3O08791 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ebf3O08791 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms