Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.74■□□□□ 0.43
Dctn1O08788 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.74■□□□□ 0.43
Dctn1O08788 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Gm13829-201ENSMUST00000119600 138 ntBASIC17.74■□□□□ 0.43
Dctn1O08788 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Dctn1O08788 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.74■□□□□ 0.43
Dctn1O08788 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Dctn1O08788 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.74■□□□□ 0.43
Dctn1O08788 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Dctn1O08788 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.74■□□□□ 0.43
Dctn1O08788 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Dctn1O08788 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dctn1O08788 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.73■□□□□ 0.43
Dctn1O08788 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.73■□□□□ 0.43
Dctn1O08788 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.73■□□□□ 0.43
Dctn1O08788 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.73■□□□□ 0.43
Dctn1O08788 Gm19220-201ENSMUST00000222682 803 ntBASIC17.73■□□□□ 0.43
Dctn1O08788 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.73■□□□□ 0.43
Dctn1O08788 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.73■□□□□ 0.43
Dctn1O08788 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dctn1O08788 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Dctn1O08788 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Dctn1O08788 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Dctn1O08788 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Dctn1O08788 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Dctn1O08788 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.72■□□□□ 0.43
Dctn1O08788 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Dctn1O08788 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Dctn1O08788 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.72■□□□□ 0.43
Dctn1O08788 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.72■□□□□ 0.43
Dctn1O08788 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.72■□□□□ 0.43
Dctn1O08788 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Dctn1O08788 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dctn1O08788 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.72■□□□□ 0.43
Dctn1O08788 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Dctn1O08788 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Dctn1O08788 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Dctn1O08788 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dctn1O08788 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dctn1O08788 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
Dctn1O08788 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.71■□□□□ 0.43
Dctn1O08788 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.71■□□□□ 0.43
Dctn1O08788 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dctn1O08788 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dctn1O08788 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Dctn1O08788 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.71■□□□□ 0.43
Dctn1O08788 Gm44719-201ENSMUST00000206404 149 ntBASIC17.71■□□□□ 0.43
Dctn1O08788 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dctn1O08788 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.71■□□□□ 0.43
Dctn1O08788 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dctn1O08788 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Dctn1O08788 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dctn1O08788 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dctn1O08788 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
Dctn1O08788 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms