Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Gm6916-202ENSMUST00000205523 195 ntBASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb9E9Q5G2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Gm12134-201ENSMUST00000122109 520 ntBASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb9E9Q5G2 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Mir8102-201ENSMUST00000184148 139 ntBASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb9E9Q5G2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb9E9Q5G2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms