Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf11E9PZM7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf11E9PZM7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Scaf11E9PZM7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf11E9PZM7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf11E9PZM7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Scaf11E9PZM7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf11E9PZM7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf11E9PZM7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf11E9PZM7 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Gm9252-201ENSMUST00000172364 1602 ntBASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf11E9PZM7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 AC155637.1-201ENSMUST00000218560 636 ntBASIC19.79■□□□□ 0.76
Scaf11E9PZM7 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.79■□□□□ 0.76
Scaf11E9PZM7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Gm37008-201ENSMUST00000195712 319 ntBASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf11E9PZM7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Olfr284-202ENSMUST00000206647 966 ntBASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.78■□□□□ 0.76
Scaf11E9PZM7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf11E9PZM7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf11E9PZM7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf11E9PZM7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf11E9PZM7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC19.77■□□□□ 0.76
Scaf11E9PZM7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf11E9PZM7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Scaf11E9PZM7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms