Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Gm15240-201ENSMUST00000118156 720 ntBASIC11.56□□□□□ -0.56
Chd6A3KFM7 Gm6023-201ENSMUST00000118217 606 ntBASIC11.56□□□□□ -0.56
Chd6A3KFM7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.56□□□□□ -0.56
Chd6A3KFM7 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.56□□□□□ -0.56
Chd6A3KFM7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Gm45098-201ENSMUST00000207179 657 ntBASIC11.55□□□□□ -0.56
Chd6A3KFM7 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.55□□□□□ -0.56
Chd6A3KFM7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Gm4986-201ENSMUST00000119731 549 ntBASIC11.55□□□□□ -0.56
Chd6A3KFM7 Gm11597-201ENSMUST00000121423 964 ntBASIC11.55□□□□□ -0.56
Chd6A3KFM7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.55□□□□□ -0.56
Chd6A3KFM7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chd6A3KFM7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.54□□□□□ -0.56
Chd6A3KFM7 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.54□□□□□ -0.56
Chd6A3KFM7 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.54□□□□□ -0.56
Chd6A3KFM7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.54□□□□□ -0.56
Chd6A3KFM7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.54□□□□□ -0.56
Chd6A3KFM7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms