Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Gm8062-201ENSMUST00000139696 444 ntBASIC12.15□□□□□ -0.46
Col6a4A2AX52 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.15□□□□□ -0.46
Col6a4A2AX52 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Mir1894-201ENSMUST00000122802 81 ntBASIC12.15□□□□□ -0.46
Col6a4A2AX52 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Gm45841-201ENSMUST00000207700 164 ntBASIC12.15□□□□□ -0.46
Col6a4A2AX52 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.15□□□□□ -0.46
Col6a4A2AX52 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.15□□□□□ -0.46
Col6a4A2AX52 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.15□□□□□ -0.46
Col6a4A2AX52 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.15□□□□□ -0.47
Col6a4A2AX52 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a4A2AX52 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a4A2AX52 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.14□□□□□ -0.47
Col6a4A2AX52 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.14□□□□□ -0.47
Col6a4A2AX52 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.14□□□□□ -0.47
Col6a4A2AX52 Gm2495-201ENSMUST00000191160 466 ntBASIC12.14□□□□□ -0.47
Col6a4A2AX52 Gm5279-201ENSMUST00000199575 745 ntBASIC12.14□□□□□ -0.47
Col6a4A2AX52 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a4A2AX52 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Gm15198-201ENSMUST00000117283 177 ntBASIC12.13□□□□□ -0.47
Col6a4A2AX52 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms