Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Igkv8-27A0A0G2JF28 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Igkv8-27A0A0G2JF28 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Igkv8-27A0A0G2JF28 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Igkv8-27A0A0G2JF28 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Igkv8-27A0A0G2JF28 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Igkv8-27A0A0G2JF28 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Igkv8-27A0A0G2JF28 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Igkv8-27A0A0G2JF28 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Igkv8-27A0A0G2JF28 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC9.02□□□□□ -0.96
Igkv8-27A0A0G2JF28 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.96
Igkv8-27A0A0G2JF28 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Igkv8-27A0A0G2JF28 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Igkv8-27A0A0G2JF28 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Igkv8-27A0A0G2JF28 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC9.02□□□□□ -0.96
Igkv8-27A0A0G2JF28 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Igkv8-27A0A0G2JF28 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Igkv8-27A0A0G2JF28 Gm37411-201ENSMUST00000194180 2282 ntBASIC9.02□□□□□ -0.96
Igkv8-27A0A0G2JF28 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
Igkv8-27A0A0G2JF28 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Gm45630-201ENSMUST00000210243 1911 ntBASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 AC135637.1-201ENSMUST00000227750 365 ntBASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Igkv8-27A0A0G2JF28 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms