Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a4Q9QZR9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Col4a4Q9QZR9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Gm6222-202ENSMUST00000182143 629 ntBASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Gm4986-201ENSMUST00000119731 549 ntBASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col4a4Q9QZR9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Gm42550-201ENSMUST00000201553 960 ntBASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Gm21769-201ENSMUST00000211922 111 ntBASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col4a4Q9QZR9 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Gm24255-201ENSMUST00000104481 128 ntBASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Gm11439-201ENSMUST00000118598 409 ntBASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Gm27341-201ENSMUST00000183570 106 ntBASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a4Q9QZR9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms