Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Gm14722-201ENSMUST00000118943 689 ntBASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Gm27275-201ENSMUST00000184318 272 ntBASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco4Q9JIS3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Smco4Q9JIS3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.55
Smco4Q9JIS3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smco4Q9JIS3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smco4Q9JIS3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms