Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Gm14701-201ENSMUST00000117156 348 ntBASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtn3Q9ES97 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
Rtn3Q9ES97 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
Rtn3Q9ES97 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Gm8396-201ENSMUST00000057361 823 ntBASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rtn3Q9ES97 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Rprl2-201ENSMUST00000157150 290 ntBASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtn3Q9ES97 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.37■□□□□ 0.05
Rtn3Q9ES97 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn3Q9ES97 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn3Q9ES97 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn3Q9ES97 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rtn3Q9ES97 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn3Q9ES97 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn3Q9ES97 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn3Q9ES97 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn3Q9ES97 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn3Q9ES97 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.37■□□□□ 0.05
Rtn3Q9ES97 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms