Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.7□□□□□ -0.22
Upk1aQ9D132 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.69□□□□□ -0.22
Upk1aQ9D132 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk1aQ9D132 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.68□□□□□ -0.22
Upk1aQ9D132 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Upk1aQ9D132 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.68□□□□□ -0.22
Upk1aQ9D132 Gm45167-201ENSMUST00000208007 322 ntBASIC13.68□□□□□ -0.22
Upk1aQ9D132 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.68□□□□□ -0.22
Upk1aQ9D132 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk1aQ9D132 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Upk1aQ9D132 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Gm15173-201ENSMUST00000122049 433 ntBASIC13.67□□□□□ -0.22
Upk1aQ9D132 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Gm6550-201ENSMUST00000187574 993 ntBASIC13.67□□□□□ -0.22
Upk1aQ9D132 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms