Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hdhd3Q9CYW4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.77□□□□□ -0.52
Hdhd3Q9CYW4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hdhd3Q9CYW4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hdhd3Q9CYW4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hdhd3Q9CYW4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Hdhd3Q9CYW4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hdhd3Q9CYW4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hdhd3Q9CYW4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Hdhd3Q9CYW4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hdhd3Q9CYW4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.75□□□□□ -0.53
Hdhd3Q9CYW4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.75□□□□□ -0.53
Hdhd3Q9CYW4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.75□□□□□ -0.53
Hdhd3Q9CYW4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hdhd3Q9CYW4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms