Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Rpl39lQ9CQD0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 AC125350.1-201ENSMUST00000225115 903 ntBASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Gm5417-201ENSMUST00000079706 384 ntBASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rpl39lQ9CQD0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rpl39lQ9CQD0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rpl39lQ9CQD0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Rpl39lQ9CQD0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rpl39lQ9CQD0 Gm5639-201ENSMUST00000122305 2403 ntBASIC9.4□□□□□ -0.91
Rpl39lQ9CQD0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rpl39lQ9CQD0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Rpl39lQ9CQD0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Gm8344-201ENSMUST00000119813 856 ntBASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Gm11355-201ENSMUST00000121120 306 ntBASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Gm27011-201ENSMUST00000182352 972 ntBASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rpl39lQ9CQD0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rpl39lQ9CQD0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms