Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Gm6659-201ENSMUST00000174752 547 ntBASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TpbpbQ9CQC0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
TpbpbQ9CQC0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TpbpbQ9CQC0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms