Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Gm11745-201ENSMUST00000121669 448 ntBASIC14.35□□□□□ -0.11
Trim33Q99PP7 Gm27494-201ENSMUST00000184735 189 ntBASIC14.35□□□□□ -0.11
Trim33Q99PP7 Gm2756-201ENSMUST00000195851 400 ntBASIC14.35□□□□□ -0.11
Trim33Q99PP7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.35□□□□□ -0.11
Trim33Q99PP7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim33Q99PP7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.34□□□□□ -0.11
Trim33Q99PP7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.34□□□□□ -0.11
Trim33Q99PP7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.34□□□□□ -0.11
Trim33Q99PP7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Gm6973-201ENSMUST00000117080 721 ntBASIC14.34□□□□□ -0.11
Trim33Q99PP7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.34□□□□□ -0.11
Trim33Q99PP7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.34□□□□□ -0.11
Trim33Q99PP7 Gm15483-201ENSMUST00000120338 456 ntBASIC14.34□□□□□ -0.11
Trim33Q99PP7 Gm27702-201ENSMUST00000184512 56 ntBASIC14.34□□□□□ -0.11
Trim33Q99PP7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trim33Q99PP7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trim33Q99PP7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim33Q99PP7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim33Q99PP7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim33Q99PP7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim33Q99PP7 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.33□□□□□ -0.11
Trim33Q99PP7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim33Q99PP7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim33Q99PP7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trim33Q99PP7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim33Q99PP7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim33Q99PP7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim33Q99PP7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms