Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Gm45384-201ENSMUST00000210451 277 ntBASIC12.68□□□□□ -0.38
Scrt1Q99M85 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.68□□□□□ -0.38
Scrt1Q99M85 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.68□□□□□ -0.38
Scrt1Q99M85 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.67□□□□□ -0.38
Scrt1Q99M85 Shd-206ENSMUST00000225145 998 ntBASIC12.67□□□□□ -0.38
Scrt1Q99M85 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.67□□□□□ -0.38
Scrt1Q99M85 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.67□□□□□ -0.38
Scrt1Q99M85 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Scrt1Q99M85 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.66□□□□□ -0.38
Scrt1Q99M85 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.66□□□□□ -0.38
Scrt1Q99M85 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scrt1Q99M85 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms