Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Clp1Q99LI9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Gm12957-201ENSMUST00000117835 377 ntBASIC15.15■□□□□ 0.02
Clp1Q99LI9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.15■□□□□ 0.02
Clp1Q99LI9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.15■□□□□ 0.02
Clp1Q99LI9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clp1Q99LI9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Gm13226-201ENSMUST00000117838 404 ntBASIC15.14■□□□□ 0.01
Clp1Q99LI9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clp1Q99LI9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Gm8463-201ENSMUST00000208573 613 ntBASIC15.14■□□□□ 0.01
Clp1Q99LI9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.14■□□□□ 0.01
Clp1Q99LI9 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.14■□□□□ 0.01
Clp1Q99LI9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clp1Q99LI9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Clp1Q99LI9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.12■□□□□ 0.01
Clp1Q99LI9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Clp1Q99LI9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms