Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cstf3Q99LI7 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Gm14042-201ENSMUST00000120139 833 ntBASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Gm9182-201ENSMUST00000217829 639 ntBASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cstf3Q99LI7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.97□□□□□ -0.17
Cstf3Q99LI7 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cstf3Q99LI7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cstf3Q99LI7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms