Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Gm25287-201ENSMUST00000103846 110 ntBASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Gm22918-201ENSMUST00000103855 110 ntBASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Gm2810-201ENSMUST00000118681 990 ntBASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Gm14603-201ENSMUST00000121275 448 ntBASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Gm3760-201ENSMUST00000167475 804 ntBASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Gm42433-201ENSMUST00000196806 940 ntBASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 AC116589.4-201ENSMUST00000222390 216 ntBASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb20Q91XZ9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Gm38225-201ENSMUST00000194001 393 ntBASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Gm5178-201ENSMUST00000219380 898 ntBASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb20Q91XZ9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms