Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Gm9385-201ENSMUST00000117563 472 ntBASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Gm12260-201ENSMUST00000122447 411 ntBASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Gm17968-201ENSMUST00000194902 784 ntBASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H1fooQ8VIK3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Olfr286-202ENSMUST00000205305 969 ntBASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.1□□□□□ -0.47
H1fooQ8VIK3 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H1fooQ8VIK3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms