Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TraipQ8VIG6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TraipQ8VIG6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TraipQ8VIG6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TraipQ8VIG6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TraipQ8VIG6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TraipQ8VIG6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TraipQ8VIG6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TraipQ8VIG6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TraipQ8VIG6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Gm15393-201ENSMUST00000120499 219 ntBASIC15.35■□□□□ 0.05
TraipQ8VIG6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TraipQ8VIG6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TraipQ8VIG6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Gm40377-201ENSMUST00000204604 2015 ntBASIC15.34■□□□□ 0.05
TraipQ8VIG6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Gm9522-201ENSMUST00000182394 926 ntBASIC15.34■□□□□ 0.05
TraipQ8VIG6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.34■□□□□ 0.05
TraipQ8VIG6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TraipQ8VIG6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TraipQ8VIG6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TraipQ8VIG6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.33■□□□□ 0.05
TraipQ8VIG6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TraipQ8VIG6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Gm22119-201ENSMUST00000175594 99 ntBASIC15.33■□□□□ 0.04
TraipQ8VIG6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.33■□□□□ 0.04
TraipQ8VIG6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.33■□□□□ 0.04
TraipQ8VIG6 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.33■□□□□ 0.04
TraipQ8VIG6 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.33■□□□□ 0.04
TraipQ8VIG6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.33■□□□□ 0.04
TraipQ8VIG6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TraipQ8VIG6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms