Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Celf4-206ENSMUST00000224553 1729 ntBASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc9Q8VC31 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc9Q8VC31 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc9Q8VC31 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc9Q8VC31 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc9Q8VC31 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc9Q8VC31 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.39■□□□□ 0.38
Ccdc9Q8VC31 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Gm27389-201ENSMUST00000183622 195 ntBASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc9Q8VC31 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms