Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim29Q8R2Q0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim29Q8R2Q0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Trim29Q8R2Q0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim29Q8R2Q0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim29Q8R2Q0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.52■□□□□ 0.23
Trim29Q8R2Q0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim29Q8R2Q0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim29Q8R2Q0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim29Q8R2Q0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Gm45612-201ENSMUST00000211320 160 ntBASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim29Q8R2Q0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim29Q8R2Q0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Trim29Q8R2Q0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim29Q8R2Q0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim29Q8R2Q0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trim29Q8R2Q0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim29Q8R2Q0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms