Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Mir7023-201ENSMUST00000185093 64 ntBASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Mir125a-201ENSMUST00000083545 68 ntBASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 BC001981-202ENSMUST00000191393 1545 ntBASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rpp40Q8R1F9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rpp40Q8R1F9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rpp40Q8R1F9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rpp40Q8R1F9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
Rpp40Q8R1F9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rpp40Q8R1F9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rpp40Q8R1F9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Gm27306-201ENSMUST00000183970 107 ntBASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Gm27680-201ENSMUST00000184192 160 ntBASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Gm44344-201ENSMUST00000200287 129 ntBASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rpp40Q8R1F9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms