Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh1Q8CGV4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh1Q8CGV4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh1Q8CGV4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.04□□□□□ -0.16
Rdh1Q8CGV4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh1Q8CGV4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh1Q8CGV4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Gm4875-201ENSMUST00000118257 786 ntBASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Gm3436-201ENSMUST00000179930 840 ntBASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Gm27838-201ENSMUST00000184829 128 ntBASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 BC001981-202ENSMUST00000191393 1545 ntBASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh1Q8CGV4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh1Q8CGV4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh1Q8CGV4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh1Q8CGV4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh1Q8CGV4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Rdh1Q8CGV4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rdh1Q8CGV4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh1Q8CGV4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh1Q8CGV4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Gm2423-201ENSMUST00000074863 733 ntBASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh1Q8CGV4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Syt7-204ENSMUST00000223586 1344 ntBASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Gm16215-201ENSMUST00000161990 637 ntBASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Gm9229-201ENSMUST00000222777 126 ntBASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh1Q8CGV4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh1Q8CGV4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms