Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rbm28Q8CGC6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rbm28Q8CGC6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rbm28Q8CGC6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Rbm28Q8CGC6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rbm28Q8CGC6 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.08■□□□□ 0.33
Rbm28Q8CGC6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Gm27533-201ENSMUST00000183800 152 ntBASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.08■□□□□ 0.32
Rbm28Q8CGC6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Gm27680-201ENSMUST00000184192 160 ntBASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Gm45098-201ENSMUST00000207179 657 ntBASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rbm28Q8CGC6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Gm9719-201ENSMUST00000162765 543 ntBASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Gm2451-201ENSMUST00000199447 999 ntBASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Gm10290-201ENSMUST00000200451 999 ntBASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Gm9063-201ENSMUST00000223299 582 ntBASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rbm28Q8CGC6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbm28Q8CGC6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rbm28Q8CGC6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms