Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Gm11478-201ENSMUST00000117851 599 ntBASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Gm11918-201ENSMUST00000121660 179 ntBASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim52Q8CDV4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Mir7654-201ENSMUST00000185082 70 ntBASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim52Q8CDV4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim52Q8CDV4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Gm27701-201ENSMUST00000184498 110 ntBASIC17.7■□□□□ 0.42
Trim52Q8CDV4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim52Q8CDV4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms