Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pabpn1Q8CCS6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Gm12208-201ENSMUST00000122004 163 ntBASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Gm42929-201ENSMUST00000198374 1286 ntBASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpn1Q8CCS6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Gm14130-201ENSMUST00000118417 987 ntBASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Gm7809-201ENSMUST00000153199 742 ntBASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpn1Q8CCS6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Gm13570-201ENSMUST00000140763 309 ntBASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Gm18584-201ENSMUST00000203098 964 ntBASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Gm13097-201ENSMUST00000210722 397 ntBASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpn1Q8CCS6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Gm5846-201ENSMUST00000193146 1414 ntBASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Gm9431-201ENSMUST00000119765 1051 ntBASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Gm8194-201ENSMUST00000159783 859 ntBASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 AC122876.1-201ENSMUST00000217619 825 ntBASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Gm9279-201ENSMUST00000223175 1606 ntBASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpn1Q8CCS6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Gm42471-201ENSMUST00000201457 1865 ntBASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC21.9■■□□□ 1.1
Pabpn1Q8CCS6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms