Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim9Q8C7M3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim9Q8C7M3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim9Q8C7M3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim9Q8C7M3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms