Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Gm7558-201ENSMUST00000193221 1165 ntBASIC13□□□□□ -0.33
Col6a6Q8C6K9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Gm19439-201ENSMUST00000198195 2273 ntBASIC13□□□□□ -0.33
Col6a6Q8C6K9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Mir7654-201ENSMUST00000185082 70 ntBASIC13□□□□□ -0.33
Col6a6Q8C6K9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a6Q8C6K9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Olfr286-202ENSMUST00000205305 969 ntBASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gm42693-201ENSMUST00000196779 631 ntBASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gm9257-201ENSMUST00000221254 232 ntBASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.99□□□□□ -0.33
Col6a6Q8C6K9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms