Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp44Q8C2S0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Gm6415-201ENSMUST00000118488 348 ntBASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Gm9719-201ENSMUST00000162765 543 ntBASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Gm45453-201ENSMUST00000211758 853 ntBASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp44Q8C2S0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Usp44Q8C2S0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Usp44Q8C2S0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Usp44Q8C2S0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp44Q8C2S0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Gm25948-201ENSMUST00000175334 112 ntBASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms