Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim47Q8C0E3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim47Q8C0E3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim47Q8C0E3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Trim47Q8C0E3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim47Q8C0E3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim47Q8C0E3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim47Q8C0E3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim47Q8C0E3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16■□□□□ 0.15
Trim47Q8C0E3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16■□□□□ 0.15
Trim47Q8C0E3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16■□□□□ 0.15
Trim47Q8C0E3 Gm16476-201ENSMUST00000221544 139 ntBASIC16■□□□□ 0.15
Trim47Q8C0E3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trim47Q8C0E3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trim47Q8C0E3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trim47Q8C0E3 Gm45133-201ENSMUST00000207548 2773 ntBASIC16■□□□□ 0.15
Trim47Q8C0E3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Gm9856-201ENSMUST00000217077 2578 ntBASIC16■□□□□ 0.15
Trim47Q8C0E3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim47Q8C0E3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Gm45453-201ENSMUST00000211758 853 ntBASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Gm9063-201ENSMUST00000223299 582 ntBASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Dupd1-202ENSMUST00000224735 548 ntBASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim47Q8C0E3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Gm44344-201ENSMUST00000200287 129 ntBASIC15.98■□□□□ 0.15
Trim47Q8C0E3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms