Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm9385-201ENSMUST00000117563 472 ntBASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Gm44335-201ENSMUST00000196879 141 ntBASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Gm44297-201ENSMUST00000198304 141 ntBASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Gm44346-201ENSMUST00000198851 141 ntBASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Depdc1bQ8BH88 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Gm8749-201ENSMUST00000117737 331 ntBASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Rpph1-201ENSMUST00000175096 319 ntBASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Depdc1bQ8BH88 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Depdc1bQ8BH88 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Depdc1bQ8BH88 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Depdc1bQ8BH88 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Depdc1bQ8BH88 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Depdc1bQ8BH88 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Depdc1bQ8BH88 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Depdc1bQ8BH88 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Depdc1bQ8BH88 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Depdc1bQ8BH88 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Depdc1bQ8BH88 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Gm13616-201ENSMUST00000120600 222 ntBASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Mir6956-201ENSMUST00000183598 62 ntBASIC15.69■□□□□ 0.1
Depdc1bQ8BH88 Mir6990-201ENSMUST00000183724 91 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms