Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tspan18Q80WR1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tspan18Q80WR1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tspan18Q80WR1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Tspan18Q80WR1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tspan18Q80WR1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tspan18Q80WR1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tspan18Q80WR1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tspan18Q80WR1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Tspan18Q80WR1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Tspan18Q80WR1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tspan18Q80WR1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Gm15487-201ENSMUST00000122373 465 ntBASIC15.33■□□□□ 0.04
Tspan18Q80WR1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tspan18Q80WR1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Gm4875-201ENSMUST00000118257 786 ntBASIC15.32■□□□□ 0.04
Tspan18Q80WR1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.32■□□□□ 0.04
Tspan18Q80WR1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Gm24694-201ENSMUST00000180054 110 ntBASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Gm27437-201ENSMUST00000183429 107 ntBASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Gm27663-201ENSMUST00000184839 110 ntBASIC15.32■□□□□ 0.04
Tspan18Q80WR1 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tspan18Q80WR1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Gm15460-201ENSMUST00000118147 391 ntBASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Mir6977-201ENSMUST00000184960 64 ntBASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tspan18Q80WR1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms