Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Gm15824-201ENSMUST00000119516 955 ntBASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf40bQ80W14 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf40bQ80W14 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Gm6266-201ENSMUST00000203844 806 ntBASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Prpf40bQ80W14 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Prpf40bQ80W14 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Prpf40bQ80W14 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf40bQ80W14 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms