Protein–RNA interactions for Protein: Q80U78

Pum1, Pumilio homolog 1, mousemouse

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum1Q80U78 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pum1Q80U78 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pum1Q80U78 Gm13226-201ENSMUST00000117838 404 ntBASIC14.35□□□□□ -0.11
Pum1Q80U78 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.35□□□□□ -0.11
Pum1Q80U78 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Pum1Q80U78 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pum1Q80U78 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Gm28911-201ENSMUST00000188837 117 ntBASIC14.35□□□□□ -0.11
Pum1Q80U78 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.35□□□□□ -0.11
Pum1Q80U78 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.35□□□□□ -0.11
Pum1Q80U78 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.35□□□□□ -0.11
Pum1Q80U78 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.35□□□□□ -0.11
Pum1Q80U78 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pum1Q80U78 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pum1Q80U78 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pum1Q80U78 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum1Q80U78 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pum1Q80U78 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.34□□□□□ -0.11
Pum1Q80U78 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.34□□□□□ -0.11
Pum1Q80U78 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.34□□□□□ -0.11
Pum1Q80U78 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pum1Q80U78 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pum1Q80U78 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.34□□□□□ -0.11
Pum1Q80U78 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.34□□□□□ -0.11
Pum1Q80U78 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
Pum1Q80U78 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.34□□□□□ -0.11
Pum1Q80U78 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.34□□□□□ -0.11
Pum1Q80U78 Gm26461-201ENSMUST00000175064 290 ntBASIC14.34□□□□□ -0.11
Pum1Q80U78 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Gm5356-201ENSMUST00000093326 615 ntBASIC14.34□□□□□ -0.11
Pum1Q80U78 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pum1Q80U78 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.34□□□□□ -0.11
Pum1Q80U78 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.34□□□□□ -0.11
Pum1Q80U78 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum1Q80U78 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.33□□□□□ -0.11
Pum1Q80U78 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pum1Q80U78 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.33□□□□□ -0.11
Pum1Q80U78 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pum1Q80U78 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.33□□□□□ -0.11
Pum1Q80U78 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pum1Q80U78 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pum1Q80U78 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pum1Q80U78 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.33□□□□□ -0.12
Pum1Q80U78 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pum1Q80U78 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms