Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh8Q7TSK3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Gm27306-201ENSMUST00000183970 107 ntBASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh8Q7TSK3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Gm13464-201ENSMUST00000119418 935 ntBASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Gm14767-201ENSMUST00000121559 586 ntBASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh8Q7TSK3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Gm13823-201ENSMUST00000119930 345 ntBASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh8Q7TSK3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms