Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Gm16198-201ENSMUST00000118766 670 ntBASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Rpph1-201ENSMUST00000175096 319 ntBASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Gm20553-201ENSMUST00000204205 844 ntBASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctnna3Q65CL1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Gm18057-201ENSMUST00000208220 503 ntBASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctnna3Q65CL1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Gm16026-204ENSMUST00000162652 683 ntBASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Gm27437-201ENSMUST00000183429 107 ntBASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.28■□□□□ 0.2
Ctnna3Q65CL1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctnna3Q65CL1 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.27■□□□□ 0.2
Ctnna3Q65CL1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctnna3Q65CL1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctnna3Q65CL1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms