Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Commd3Q63829 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Commd3Q63829 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Commd3Q63829 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Commd3Q63829 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Commd3Q63829 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Commd3Q63829 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Commd3Q63829 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.04□□□□□ -0.48
Commd3Q63829 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Commd3Q63829 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Commd3Q63829 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Commd3Q63829 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.03□□□□□ -0.48
Commd3Q63829 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.03□□□□□ -0.48
Commd3Q63829 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Gm10013-201ENSMUST00000106074 672 ntBASIC12.03□□□□□ -0.48
Commd3Q63829 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.03□□□□□ -0.48
Commd3Q63829 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Commd3Q63829 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.03□□□□□ -0.48
Commd3Q63829 Gm44454-201ENSMUST00000198541 138 ntBASIC12.03□□□□□ -0.48
Commd3Q63829 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.03□□□□□ -0.48
Commd3Q63829 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.03□□□□□ -0.48
Commd3Q63829 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Commd3Q63829 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Commd3Q63829 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.03□□□□□ -0.48
Commd3Q63829 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Commd3Q63829 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.03□□□□□ -0.48
Commd3Q63829 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Commd3Q63829 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Commd3Q63829 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.02□□□□□ -0.48
Commd3Q63829 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Commd3Q63829 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Commd3Q63829 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Commd3Q63829 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Commd3Q63829 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Commd3Q63829 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Commd3Q63829 Rprl3-201ENSMUST00000157400 290 ntBASIC12.02□□□□□ -0.49
Commd3Q63829 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.02□□□□□ -0.49
Commd3Q63829 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.02□□□□□ -0.49
Commd3Q63829 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.02□□□□□ -0.49
Commd3Q63829 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.02□□□□□ -0.49
Commd3Q63829 Gm45328-201ENSMUST00000210942 917 ntBASIC12.02□□□□□ -0.49
Commd3Q63829 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Commd3Q63829 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Commd3Q63829 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Commd3Q63829 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.02□□□□□ -0.49
Commd3Q63829 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Commd3Q63829 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Commd3Q63829 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Commd3Q63829 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Commd3Q63829 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Commd3Q63829 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Commd3Q63829 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Commd3Q63829 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Commd3Q63829 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Commd3Q63829 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Commd3Q63829 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Commd3Q63829 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Commd3Q63829 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms