Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.72■□□□□ 0.27
Scn9aQ62205 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn9aQ62205 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.72■□□□□ 0.27
Scn9aQ62205 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.72■□□□□ 0.27
Scn9aQ62205 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn9aQ62205 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn9aQ62205 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Scn9aQ62205 Gm4857-201ENSMUST00000192718 785 ntBASIC16.72■□□□□ 0.27
Scn9aQ62205 Gm43758-201ENSMUST00000199500 367 ntBASIC16.72■□□□□ 0.27
Scn9aQ62205 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.72■□□□□ 0.27
Scn9aQ62205 Gm18473-201ENSMUST00000220543 868 ntBASIC16.72■□□□□ 0.27
Scn9aQ62205 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Scn9aQ62205 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Scn9aQ62205 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn9aQ62205 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Scn9aQ62205 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scn9aQ62205 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn9aQ62205 Gm13385-201ENSMUST00000121089 220 ntBASIC16.71■□□□□ 0.27
Scn9aQ62205 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn9aQ62205 Gm24526-201ENSMUST00000082921 158 ntBASIC16.71■□□□□ 0.27
Scn9aQ62205 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn9aQ62205 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn9aQ62205 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Scn9aQ62205 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn9aQ62205 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn9aQ62205 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Scn9aQ62205 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn9aQ62205 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn9aQ62205 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn9aQ62205 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scn9aQ62205 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn9aQ62205 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn9aQ62205 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn9aQ62205 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scn9aQ62205 Rn7s1-201ENSMUST00000174924 300 ntBASIC16.71■□□□□ 0.27
Scn9aQ62205 Rn7s2-201ENSMUST00000175032 300 ntBASIC16.71■□□□□ 0.27
Scn9aQ62205 Gm26461-201ENSMUST00000175064 290 ntBASIC16.71■□□□□ 0.27
Scn9aQ62205 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn9aQ62205 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Scn9aQ62205 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.71■□□□□ 0.26
Scn9aQ62205 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn9aQ62205 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Scn9aQ62205 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.7■□□□□ 0.26
Scn9aQ62205 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
Scn9aQ62205 Proscos-202ENSMUST00000178990 666 ntBASIC16.7■□□□□ 0.26
Scn9aQ62205 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.7■□□□□ 0.26
Scn9aQ62205 Gm27516-201ENSMUST00000184237 98 ntBASIC16.7■□□□□ 0.26
Scn9aQ62205 Gm43822-201ENSMUST00000200285 476 ntBASIC16.7■□□□□ 0.26
Scn9aQ62205 Gm38671-201ENSMUST00000200573 130 ntBASIC16.7■□□□□ 0.26
Scn9aQ62205 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn9aQ62205 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Scn9aQ62205 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Scn9aQ62205 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.7■□□□□ 0.26
Scn9aQ62205 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn9aQ62205 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn9aQ62205 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Scn9aQ62205 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.69■□□□□ 0.26
Scn9aQ62205 Gm6152-201ENSMUST00000151704 340 ntBASIC16.69■□□□□ 0.26
Scn9aQ62205 Gm8810-201ENSMUST00000172895 754 ntBASIC16.69■□□□□ 0.26
Scn9aQ62205 Gm27331-201ENSMUST00000183705 60 ntBASIC16.69■□□□□ 0.26
Scn9aQ62205 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn9aQ62205 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn9aQ62205 Gm7783-201ENSMUST00000204795 781 ntBASIC16.69■□□□□ 0.26
Scn9aQ62205 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn9aQ62205 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn9aQ62205 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Scn9aQ62205 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn9aQ62205 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn9aQ62205 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn9aQ62205 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn9aQ62205 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.69■□□□□ 0.26
Scn9aQ62205 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms