Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Col11a1Q61245 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col11a1Q61245 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.87■□□□□ 0.13
Col11a1Q61245 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.87■□□□□ 0.13
Col11a1Q61245 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.87■□□□□ 0.13
Col11a1Q61245 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Col11a1Q61245 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col11a1Q61245 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col11a1Q61245 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 BC037039-201ENSMUST00000192003 2205 ntBASIC15.87■□□□□ 0.13
Col11a1Q61245 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.87■□□□□ 0.13
Col11a1Q61245 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col11a1Q61245 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Col11a1Q61245 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.87■□□□□ 0.13
Col11a1Q61245 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Gm29396-201ENSMUST00000185659 716 ntBASIC15.87■□□□□ 0.13
Col11a1Q61245 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.87■□□□□ 0.13
Col11a1Q61245 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col11a1Q61245 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.86■□□□□ 0.13
Col11a1Q61245 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Col11a1Q61245 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.86■□□□□ 0.13
Col11a1Q61245 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.86■□□□□ 0.13
Col11a1Q61245 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col11a1Q61245 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col11a1Q61245 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Col11a1Q61245 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col11a1Q61245 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col11a1Q61245 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.85■□□□□ 0.13
Col11a1Q61245 Gm6023-201ENSMUST00000118217 606 ntBASIC15.85■□□□□ 0.13
Col11a1Q61245 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.85■□□□□ 0.13
Col11a1Q61245 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.85■□□□□ 0.13
Col11a1Q61245 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.85■□□□□ 0.13
Col11a1Q61245 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.85■□□□□ 0.13
Col11a1Q61245 Gm37008-201ENSMUST00000195712 319 ntBASIC15.85■□□□□ 0.13
Col11a1Q61245 Gm44364-201ENSMUST00000198368 141 ntBASIC15.85■□□□□ 0.13
Col11a1Q61245 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.85■□□□□ 0.13
Col11a1Q61245 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Col11a1Q61245 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Col11a1Q61245 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.85■□□□□ 0.13
Col11a1Q61245 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col11a1Q61245 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col11a1Q61245 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col11a1Q61245 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Col11a1Q61245 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.84■□□□□ 0.13
Col11a1Q61245 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.84■□□□□ 0.13
Col11a1Q61245 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.84■□□□□ 0.13
Col11a1Q61245 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col11a1Q61245 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Col11a1Q61245 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.84■□□□□ 0.13
Col11a1Q61245 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms