Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Gm7889-201ENSMUST00000185591 958 ntBASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-3Q5R1C3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav3-3Q5R1C3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms