Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Syt7-205ENSMUST00000224135 1557 ntBASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rc3h1Q4VGL6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Gm9229-201ENSMUST00000222777 126 ntBASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rc3h1Q4VGL6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Gm3436-201ENSMUST00000179930 840 ntBASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Gm24694-201ENSMUST00000180054 110 ntBASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Gm27663-201ENSMUST00000184839 110 ntBASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Gm6218-201ENSMUST00000219812 628 ntBASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rc3h1Q4VGL6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rc3h1Q4VGL6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Rc3h1Q4VGL6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rc3h1Q4VGL6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms