Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Gm4875-201ENSMUST00000118257 786 ntBASIC17.22■□□□□ 0.35
SfswapQ3USH5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Mir125a-201ENSMUST00000083545 68 ntBASIC17.22■□□□□ 0.35
SfswapQ3USH5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfswapQ3USH5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Gm15653-201ENSMUST00000119247 907 ntBASIC17.21■□□□□ 0.35
SfswapQ3USH5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.21■□□□□ 0.35
SfswapQ3USH5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfswapQ3USH5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.2■□□□□ 0.34
SfswapQ3USH5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.2■□□□□ 0.34
SfswapQ3USH5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.2■□□□□ 0.34
SfswapQ3USH5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfswapQ3USH5 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.2■□□□□ 0.34
SfswapQ3USH5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SfswapQ3USH5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Gm29667-201ENSMUST00000190817 490 ntBASIC17.19■□□□□ 0.34
SfswapQ3USH5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.19■□□□□ 0.34
SfswapQ3USH5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfswapQ3USH5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms