Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Gm13186-201ENSMUST00000118031 316 ntBASIC11.92□□□□□ -0.5
Trim63Q38HM4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Gm18671-201ENSMUST00000214826 683 ntBASIC11.92□□□□□ -0.5
Trim63Q38HM4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim63Q38HM4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim63Q38HM4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim63Q38HM4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim63Q38HM4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.91□□□□□ -0.5
Trim63Q38HM4 Gm18115-201ENSMUST00000221209 621 ntBASIC11.91□□□□□ -0.5
Trim63Q38HM4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim63Q38HM4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.9□□□□□ -0.5
Trim63Q38HM4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Gm6365-201ENSMUST00000054711 744 ntBASIC11.9□□□□□ -0.5
Trim63Q38HM4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.9□□□□□ -0.5
Trim63Q38HM4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim63Q38HM4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim63Q38HM4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim63Q38HM4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trim63Q38HM4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim63Q38HM4 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim63Q38HM4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim63Q38HM4 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim63Q38HM4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.9□□□□□ -0.51
Trim63Q38HM4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms