Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.69□□□□□ -0.38
Thbs3Q05895 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.69□□□□□ -0.38
Thbs3Q05895 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.69□□□□□ -0.38
Thbs3Q05895 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.69□□□□□ -0.38
Thbs3Q05895 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.69□□□□□ -0.38
Thbs3Q05895 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Thbs3Q05895 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Thbs3Q05895 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Thbs3Q05895 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Thbs3Q05895 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Thbs3Q05895 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.68□□□□□ -0.38
Thbs3Q05895 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Thbs3Q05895 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.68□□□□□ -0.38
Thbs3Q05895 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Gm10275-202ENSMUST00000168697 495 ntBASIC12.68□□□□□ -0.38
Thbs3Q05895 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Gm44335-201ENSMUST00000196879 141 ntBASIC12.68□□□□□ -0.38
Thbs3Q05895 Gm44297-201ENSMUST00000198304 141 ntBASIC12.68□□□□□ -0.38
Thbs3Q05895 Gm44346-201ENSMUST00000198851 141 ntBASIC12.68□□□□□ -0.38
Thbs3Q05895 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.68□□□□□ -0.38
Thbs3Q05895 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.68□□□□□ -0.38
Thbs3Q05895 Chchd1-203ENSMUST00000224633 557 ntBASIC12.68□□□□□ -0.38
Thbs3Q05895 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Gm10275-201ENSMUST00000092620 635 ntBASIC12.68□□□□□ -0.38
Thbs3Q05895 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.68□□□□□ -0.38
Thbs3Q05895 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thbs3Q05895 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Thbs3Q05895 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Thbs3Q05895 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Thbs3Q05895 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.67□□□□□ -0.38
Thbs3Q05895 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Thbs3Q05895 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.67□□□□□ -0.38
Thbs3Q05895 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms