Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CiitaP79621 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CiitaP79621 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CiitaP79621 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CiitaP79621 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CiitaP79621 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CiitaP79621 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CiitaP79621 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CiitaP79621 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CiitaP79621 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CiitaP79621 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.64■□□□□ 0.09
CiitaP79621 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.64■□□□□ 0.09
CiitaP79621 Gm27838-201ENSMUST00000184829 128 ntBASIC15.64■□□□□ 0.09
CiitaP79621 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.64■□□□□ 0.09
CiitaP79621 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.64■□□□□ 0.09
CiitaP79621 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CiitaP79621 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CiitaP79621 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.63■□□□□ 0.09
CiitaP79621 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
CiitaP79621 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CiitaP79621 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CiitaP79621 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CiitaP79621 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.63■□□□□ 0.09
CiitaP79621 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.63■□□□□ 0.09
CiitaP79621 Gm3436-201ENSMUST00000179930 840 ntBASIC15.63■□□□□ 0.09
CiitaP79621 Mir6977-201ENSMUST00000184960 64 ntBASIC15.63■□□□□ 0.09
CiitaP79621 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.63■□□□□ 0.09
CiitaP79621 Gm9229-201ENSMUST00000222777 126 ntBASIC15.63■□□□□ 0.09
CiitaP79621 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.63■□□□□ 0.09
CiitaP79621 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.63■□□□□ 0.09
CiitaP79621 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CiitaP79621 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CiitaP79621 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CiitaP79621 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.62■□□□□ 0.09
CiitaP79621 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.62■□□□□ 0.09
CiitaP79621 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Gm4875-201ENSMUST00000118257 786 ntBASIC15.62■□□□□ 0.09
CiitaP79621 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.62■□□□□ 0.09
CiitaP79621 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CiitaP79621 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.62■□□□□ 0.09
CiitaP79621 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.62■□□□□ 0.09
CiitaP79621 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CiitaP79621 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CiitaP79621 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms