Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.29□□□□□ -0.12
Shox2P70390 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.29□□□□□ -0.12
Shox2P70390 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.29□□□□□ -0.12
Shox2P70390 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.29□□□□□ -0.12
Shox2P70390 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Shox2P70390 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Shox2P70390 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.28□□□□□ -0.12
Shox2P70390 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Shox2P70390 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Shox2P70390 Gm6345-202ENSMUST00000180900 204 ntBASIC14.28□□□□□ -0.12
Shox2P70390 Mir7071-201ENSMUST00000184847 69 ntBASIC14.28□□□□□ -0.12
Shox2P70390 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.28□□□□□ -0.12
Shox2P70390 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Olfr286-202ENSMUST00000205305 969 ntBASIC14.28□□□□□ -0.12
Shox2P70390 Gm18032-201ENSMUST00000222541 538 ntBASIC14.28□□□□□ -0.12
Shox2P70390 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.28□□□□□ -0.12
Shox2P70390 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.28□□□□□ -0.12
Shox2P70390 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Shox2P70390 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shox2P70390 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shox2P70390 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shox2P70390 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shox2P70390 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Shox2P70390 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Shox2P70390 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Shox2P70390 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Shox2P70390 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Shox2P70390 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shox2P70390 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shox2P70390 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shox2P70390 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.27□□□□□ -0.13
Shox2P70390 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.27□□□□□ -0.13
Shox2P70390 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.27□□□□□ -0.13
Shox2P70390 Gm10252-201ENSMUST00000209541 832 ntBASIC14.27□□□□□ -0.13
Shox2P70390 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Shox2P70390 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.27□□□□□ -0.13
Shox2P70390 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Shox2P70390 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.27□□□□□ -0.13
Shox2P70390 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.27□□□□□ -0.13
Shox2P70390 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shox2P70390 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Shox2P70390 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.26□□□□□ -0.13
Shox2P70390 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms